STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebi3Epstein-Barr virus induced 3. (249 aa)    
Predicted Functional Partners:
csf3r
Colony stimulating factor 3 receptor (granulocyte).
   
 0.792
LOC103463734
Interleukin 12 receptor, beta 2a.
   
 0.652
LOC103478037
Interleukin 11a.
     
 0.629
LOC103463800
Calmegin.
    
  0.623
canx
Calnexin.
    
  0.623
LOC103469301
Uncharacterized protein.
   
 0.606
LOC103463735
Uncharacterized protein.
   
 0.606
il6st
Uncharacterized protein.
   
 0.606
ENSPREP00000009130
Uncharacterized protein.
   
 0.553
ENSPREP00000018089
Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
   
 0.553
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.