STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem101Transmembrane protein 101. (255 aa)    
Predicted Functional Partners:
tmem223
Transmembrane protein 223.
   
  
 0.551
stk17b
Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.
      
 0.522
tmem208
Transmembrane protein 208.
      
 0.477
tmem59l
Transmembrane protein 59-like.
      
 0.474
tmem115
Transmembrane protein 115.
      
 0.474
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
      
 0.470
gatad1
GATA zinc finger domain containing 1.
      
 0.448
tfg
Trafficking from ER to golgi regulator.
      
 0.440
tmem11
Transmembrane protein 11.
      
 0.426
ndufb11
NADH:ubiquinone oxidoreductase subunit B11.
   
  
 0.419
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.