STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
twsg1Twisted gastrulation BMP signaling modulator 1. (217 aa)    
Predicted Functional Partners:
chrd
Chordin; Belongs to the chordin family.
    
 
 0.734
gdf15
TGF_BETA_2 domain-containing protein.
   
 
 0.567
bmper
BMP binding endothelial regulator.
      
 0.549
LOC103465576
Nuclear receptor coactivator 3.
      
 0.527
LOC103457384
Solute carrier family 24 member 4b; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.483
LOC103466252
Dickkopf WNT signaling pathway inhibitor 3b.
   
  
 0.477
NCOA3
Nuclear receptor coactivator.
      
 0.477
smoc1
SPARC related modular calcium binding 1.
      
 0.477
bmp4
Bone morphogenetic protein 4.
   
 
 0.454
bmp2
Bone morphogenetic protein 2b.
   
 
 0.454
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.