STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000015281NYD-SP28 domain-containing protein. (427 aa)    
Predicted Functional Partners:
ENSPREP00000017751
Dynein_attach_N domain-containing protein.
   
 
 0.657
drc7
Uncharacterized protein.
   
  
 0.616
rsph9
Radial spoke head 9 homolog.
   
  
 0.579
drc3
Dynein regulatory complex subunit 3.
   
  
 0.560
rsph1
Uncharacterized protein.
   
  
 0.553
ENSPREP00000009737
Uncharacterized protein.
      
 0.549
armc4
Armadillo repeat containing 4.
   
  
 0.488
dnali1
Dynein, axonemal, light intermediate chain 1.
      
 0.470
zmynd10
Zinc finger, MYND-type containing 10.
   
  
 0.461
DNAAF5
Dynein axonemal assembly factor 5.
      
 0.433
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.