STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475546Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b. (1358 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.650
LOC103467749
Uncharacterized protein.
    
 0.631
rap1b
Uncharacterized protein.
    
 0.631
LOC103464617
RAP1A, member of RAS oncogene family b.
    
 0.631
LOC103462596
Talin 2a.
    
 0.606
tln2
Talin 2b.
    
 0.606
LOC103473492
Talin 1.
    
 0.606
ENSPREP00000017779
FERM domain-containing protein.
    
 0.606
tlnrd1
Talin rod domain containing 1.
    
 0.606
pebp1
Phosphatidylethanolamine binding protein 1.
     
 0.522
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.