STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103461641COesterase domain-containing protein. (872 aa)    
Predicted Functional Partners:
LOC103481553
Uncharacterized protein.
   
 0.808
LOC103458986
Uncharacterized protein.
   
 0.808
nrxn1
Neurexin 1b.
   
 0.808
rabif
RAB interacting factor.
      
 0.597
nf1
Neurofibromin 1b.
      
 0.594
wdr43
WD repeat domain 43.
   
 0.575
utp20
UTP20 small subunit processome component.
   
 0.540
utp4
UTP4 small subunit processome component.
    
 0.539
utp15
UTP15 small subunit processome component.
   
 0.520
ENSPREP00000008920
Uncharacterized protein.
   
  0.519
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.