STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scg2Uncharacterized protein. (622 aa)    
Predicted Functional Partners:
LOC103480135
VGF nerve growth factor inducible.
   
  
 0.621
LOC103464384
GNAS complex locus.
      
 0.602
GNAS
GNAS complex locus.
      
 0.599
ENSPREP00000019657
Uncharacterized protein.
   
 
 0.551
LOC103469300
Relaxin 3a.
      
 0.485
scg3
Secretogranin III.
   
  
 0.477
igfbp6
Insulin-like growth factor binding protein 6b.
      
 0.475
nmu
NMU domain-containing protein.
   
  
 0.422
cpe
Carboxypeptidase E.
   
  
 0.406
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.