STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
avenApoptosis, caspase activation inhibitor. (271 aa)    
Predicted Functional Partners:
apaf1
Apoptotic peptidase activating factor 1.
    
 0.977
casp9
Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
     
 0.606
LOC103477223
Cystatin domain-containing protein; Belongs to the cystatin family.
    
 0.562
tpx2
TPX2 microtubule nucleation factor.
    
 0.562
LOC103456653
Cystatin domain-containing protein; Belongs to the cystatin family.
    
 0.562
LOC103456655
Cystatin domain-containing protein; Belongs to the cystatin family.
    
 0.562
LOC103456681
Uncharacterized protein.
    
 0.562
LOC103456588
Cystatin domain-containing protein.
    
 0.562
csta
Cystatin A; Belongs to the cystatin family.
    
 0.562
sec63
SEC63 homolog, protein translocation regulator.
      
 0.549
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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