STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mal2Mal, T cell differentiation protein 2 (gene/pseudogene). (186 aa)    
Predicted Functional Partners:
tpd52
Tumor protein D52.
   
 
 0.623
LOC103461908
Tpd52 like 2b.
   
 
 0.564
ctdnep1
CTD nuclear envelope phosphatase 1b.
      
 0.549
LOC103463410
Si:ch211-191a24.4.
      
 0.471
LOC103467737
Uncharacterized protein.
   
 
 0.459
Sh3yl1
SH3 and SYLF domain containing 1.
   
  
 0.450
rad1
RAD1 homolog (S. pombe).
      
 0.440
CDC42
Cell division cycle 42.
      
 0.422
LOC103465423
Cell division cycle 42.
      
 0.422
RPS20
Ribosomal protein S20.
   
  
 0.407
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.