STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468952Coronin; Belongs to the WD repeat coronin family. (456 aa)    
Predicted Functional Partners:
sez6l2
Seizure related 6 homolog (mouse)-like 2.
  
 
 0.686
dut
Deoxyuridine triphosphatase.
      0.680
LOC103469109
Protein yippee-like; Belongs to the yippee family.
    
 
 0.656
ppp4c
Serine/threonine-protein phosphatase.
    
 
 0.649
ENSPREP00000034105
Proline-rich transmembrane protein 2.
      
 0.647
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
  
  
 0.590
fpgs
Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.
    
 0.580
kctd13
Potassium channel tetramerization domain containing 13.
      
 0.566
kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.533
ephx2
Epoxide hydrolase 2, cytoplasmic.
    
 0.528
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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