STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grem1Gremlin 1a, DAN family BMP antagonist. (170 aa)    
Predicted Functional Partners:
grem2
Gremlin 2, DAN family BMP antagonist a.
  
  
 
0.904
GREM1
Gremlin.
  
  
 
0.902
bmp4
Bone morphogenetic protein 4.
    
 0.739
bmp2
Bone morphogenetic protein 2b.
    
 0.739
LOC103474638
Bone morphogenetic protein 16.
    
 0.739
LOC103467591
Bone morphogenetic protein 7b.
    
 0.684
LOC103465082
Bone morphogenetic protein 7a.
    
 0.684
bmp6
Bone morphogenetic protein 6.
    
 0.684
bmp5
Bone morphogenetic protein 5.
    
 0.684
LOC103478252
Growth differentiation factor 6a.
    
 0.670
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.