STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asic1Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (560 aa)    
Predicted Functional Partners:
poli
Polymerase (DNA directed) iota.
     
 0.598
LOC103467672
Uncharacterized protein; Belongs to the glycosyl hydrolase 18 family.
      
 0.594
LOC103465448
Chitinase, acidic.3; Belongs to the glycosyl hydrolase 18 family.
      
 0.594
LOC103465450
Chitinase, acidic.1; Belongs to the glycosyl hydrolase 18 family.
      
 0.594
stoml1
Stomatin (EPB72)-like 1.
    
 0.565
gak
Cyclin G associated kinase.
      
 0.543
WDR1
WD repeat domain 1.
      
 0.502
LOC103456598
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.415
nedd4
E3 ubiquitin-protein ligase.
    
 0.402
LOC103461931
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2a.
    
 0.402
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.