STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex11gPeroxisomal biogenesis factor 11 gamma. (254 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
   
 0.951
pex11a
Peroxisomal biogenesis factor 11 alpha.
    
 0.944
pex11b
Peroxisomal biogenesis factor 11 beta.
    
 0.944
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.871
pex14
Peroxisomal biogenesis factor 14.
    
 0.849
pex3
Peroxisomal biogenesis factor 3.
   
 0.803
fam185a
Family with sequence similarity 185 member A.
    
 0.782
pex16
Peroxisomal membrane protein PEX16.
   
 
 0.769
pex6
Peroxisomal biogenesis factor 6.
    
 0.675
pex2
Peroxisomal biogenesis factor 2.
   
 0.634
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.