STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458439Receptor expression-enhancing protein. (184 aa)    
Predicted Functional Partners:
snx15
Sorting nexin 15.
    
   0.841
Sec61b
Uncharacterized protein.
   
 
 0.587
rhbdd3
Rhomboid domain containing 3.
      
 0.550
nxnl2
Nucleoredoxin like 2.
      
 0.534
LOC103476605
Uncharacterized protein.
    
 
 0.510
lnpk
Limb and neural patterns a.
    
 
 0.510
LOC103473160
Receptor expression-enhancing protein.
  
 
 
0.502
LOC103480116
Reticulon.
    
 
 0.500
ENSPREP00000009000
Reticulon.
    
 
 0.500
ENSPREP00000018444
Uncharacterized protein.
    
 
 0.500
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.