STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466531Uncharacterized protein. (754 aa)    
Predicted Functional Partners:
lef1
Lymphoid enhancer-binding factor 1.
    
 0.956
tcf7
Transcription factor 7.
    
 0.956
tcf7l2
Transcription factor 7 like 2.
    
 0.950
LOC103470543
Transcription factor 7 like 1b.
    
 0.950
LOC103473136
HMG box domain-containing protein.
    
 0.950
LOC103480959
HMG box domain-containing protein.
    
 0.950
LOC103473327
HMG box domain-containing protein.
    
 0.950
LOC103473336
HMG box domain-containing protein.
    
 0.950
LOC103469257
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.916
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.916
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.