STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbp2Retinol binding protein 2a, cellular; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)    
Predicted Functional Partners:
LOC103480983
Lecithin retinol acyltransferase b, tandem duplicate 1.
     
 0.714
lrat
LRAT domain-containing protein.
     
 0.691
apob
Apolipoprotein Ba.
   
 
 0.570
igfals
Insulin-like growth factor binding protein, acid labile subunit.
      
 0.529
LOC103474297
Activating transcription factor 5b.
      
 0.529
LOC103458238
Retinol dehydrogenase 12.
   
 
 0.504
LOC103457447
Apolipoprotein Bb, tandem duplicate 2.
   
 
 0.496
ENSPREP00000010257
Uncharacterized protein.
   
 
 0.496
ENSPREP00000010344
Vitellogenin domain-containing protein.
   
 
 0.496
LOC103470380
Aldo-keto reductase family 1, member A1a (aldehyde reductase).
   
  0.469
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.