STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474941Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (477 aa)    
Predicted Functional Partners:
ENSPREP00000027150
Uncharacterized protein.
   
  0.728
TUBB1
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
  
0.719
ENSPREP00000019326
Tubulin domain-containing protein.
  
 0.712
ENSPREP00000015184
Tubulin domain-containing protein.
  
0.669
ENSPREP00000007274
Tubulin domain-containing protein.
  
0.665
LOC103475018
Tubulin domain-containing protein.
 
0.660
ENSPREP00000000463
Tubulin domain-containing protein.
  
0.657
LOC103464382
Tubulin domain-containing protein.
 
0.657
ENSPREP00000026164
Tubulin domain-containing protein.
  
0.657
ENSPREP00000021616
Tubulin domain-containing protein.
  
0.656
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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