STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vcpkmtValosin containing protein lysine (K) methyltransferase. (223 aa)    
Predicted Functional Partners:
LOC103482061
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.961
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.961
SPATA5
Spermatogenesis associated 5.
   
 0.798
spata5l1
Spermatogenesis associated 5-like 1.
   
 0.798
ubxn6
UBX domain protein 6.
    
 
 0.620
ENSPREP00000010030
Electron transfer flavoprotein subunit beta.
     
 0.586
mettl18
Methyltransferase like 18.
   
  
 0.576
eef2kmt
Eukaryotic elongation factor 2 lysine methyltransferase.
   
 
 0.562
etfbkmt
Electron transfer flavoprotein subunit beta lysine methyltransferase.
      
 0.549
LOC103478924
FATP synthase c subunit lysine N-methyltransferase.
   
 
 0.543
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.