STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eya4Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (613 aa)    
Predicted Functional Partners:
tbpl1
TBP-like 1.
   
  
 0.684
hbs1l
HBS1-like translational GTPase.
      
 0.645
six1
SIX homeobox 1a.
   
 
 0.565
LOC103474648
SIX homeobox 5.
   
 
 0.553
LOC103474650
SIX homeobox 9.
   
 
 0.553
six2
SIX homeobox 2a.
   
 
 0.553
six4
SIX homeobox 4a.
   
 
 0.553
rps12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
      
 0.528
aldh8a1
Aldehyde dehydrogenase 8 family, member A1; Belongs to the aldehyde dehydrogenase family.
      
 0.525
rp9
RP9 pre-mRNA splicing factor.
      
 0.502
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.