STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcapTitin-cap (telethonin). (187 aa)    
Predicted Functional Partners:
MYOZ1
Myozenin 1.
   
 
 0.717
LOC103468924
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
 
 0.686
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
 
 0.671
naglu
N-acetylglucosaminidase, alpha.
      
 0.649
LOC103480682
Myozenin 2a.
   
 
 0.629
myot
Myotilin.
   
  
 0.608
neb
Nebulin.
   
 
 0.571
pex7
Peroxisomal biogenesis factor 7.
      
 0.549
slc25a3
Solute carrier family 25 member 3a; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.535
LOC103471054
Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
      
 0.528
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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