STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476197Creatine kinase, muscle a; Belongs to the ATP:guanido phosphotransferase family. (392 aa)    
Predicted Functional Partners:
gamt
Guanidinoacetate N-methyltransferase; Converts guanidinoacetate to creatine, using S- adenosylmethionine as the methyl donor. Belongs to the class I-like SAM-binding methyltransferase superfamily. RMT2 methyltransferase family.
   
 
 0.928
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.695
MYOZ1
Myozenin 1.
   
  
 0.694
LOC103463110
Kininogen 1.
   
  
 0.630
LOC103461533
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.611
Tpi1
Triosephosphate isomerase.
   
 
 0.591
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 
 0.576
acta1
Uncharacterized protein.
   
 
 0.566
tmod4
Tropomodulin 4 (muscle).
   
 
 0.558
LOC103481362
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 
 0.538
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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