STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcf21Transcription factor 21. (175 aa)    
Predicted Functional Partners:
myl7
Myosin, light chain 7, regulatory.
   
  
 0.651
LOC103463652
Transcription factor 3b.
   
 0.610
TCF4
Transcription factor 4.
   
 0.610
ENSPREP00000026287
Uncharacterized protein.
   
 0.610
tcf12
Transcription factor 12.
   
 0.610
LOC103466449
BHLH domain-containing protein.
   
 0.561
LOC103457836
T-box transcription factor 18.
      
 0.558
LOC103466925
GATA binding protein 5.
   
 0.525
cryaa
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
      
 0.523
gata4
GATA binding protein 4.
   
 0.502
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.