STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rapsnReceptor-associated protein of the synapse, 43kD. (395 aa)    
Predicted Functional Partners:
musk
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
  
 0.657
agrn
Agrin.
      
 0.645
DOK7
Docking protein 7.
      
 0.644
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
 
 0.594
LOC103472525
Neuralized E3 ubiquitin protein ligase 1Aa.
      
 0.552
neurl1b
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.552
ENSPREP00000010922
NHR domain-containing protein.
      
 0.552
LOC103476780
Uncharacterized protein.
      
 0.552
chrnd
Cholinergic receptor, nicotinic, delta (muscle).
   
 
 0.534
LOC103475776
Cholinergic receptor, nicotinic, epsilon.
   
 
 0.530
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.