STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478000Uncharacterized protein; Belongs to the peptidase S1 family. (712 aa)    
Predicted Functional Partners:
ENSPREP00000016614
Peptidase S1 domain-containing protein.
  
  
 
0.901
LOC103467244
Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family.
   
 0.766
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.565
LOC103464537
Macrophage stimulating 1 receptor a.
    
  0.565
mst1r
Macrophage stimulating 1 receptor b.
    
  0.565
COLEC10
Collectin subfamily member 10.
    
 0.523
colec11
Collectin sub-family member 11.
    
 0.523
ENSPREP00000003536
Complement 4B (Chido blood group).
   
 0.504
ENSPREP00000003572
NTR domain-containing protein.
   
 0.504
LOC103465934
C-type lectin domain-containing protein.
   
 0.492
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.