STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mybV-myb avian myeloblastosis viral oncogene homolog. (597 aa)    
Predicted Functional Partners:
LOC103464091
CREB binding protein a.
   
 
 0.930
crebbp
CREB binding protein b.
   
 
 0.930
LOC103467753
CCAAT enhancer binding protein beta.
    
 0.901
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.812
spi1
Spi-1 proto-oncogene b.
     
 0.802
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.788
LOC103477443
Runt-related transcription factor.
     
 0.762
lin37
Lin-37 DREAM MuvB core complex component.
   
 0.747
LOC103468460
E1A binding protein p300 b.
   
 
 0.739
LOC103482005
E1A binding protein p300 a.
   
 
 0.739
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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