STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000016835Dynein light chain. (104 aa)    
Predicted Functional Partners:
ENSPREP00000031839
Uncharacterized protein.
  
     0.516
ENSPREP00000003288
Uncharacterized protein.
  
     0.510
ENSPREP00000020138
Uncharacterized protein.
  
     0.496
ENSPREP00000016431
Uncharacterized protein.
  
     0.493
ENSPREP00000031902
Uncharacterized protein.
  
     0.492
ENSPREP00000033138
Uncharacterized protein.
  
     0.488
ENSPREP00000011087
Uncharacterized protein.
  
     0.486
ENSPREP00000001509
Uncharacterized protein.
  
     0.436
ENSPREP00000030926
Uncharacterized protein.
  
     0.432
ENSPREP00000007386
Uncharacterized protein.
  
     0.420
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.