STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp10dPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1228 aa)    
Predicted Functional Partners:
LOC103460995
PhoLip_ATPase_N domain-containing protein.
 
      0.854
kif21b
Kinesin family member 21B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.681
Pln
Uncharacterized protein.
    
 0.508
LOC103459948
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.486
LOC103479551
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.486
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.486
LOC103458601
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.486
acsl3
Uncharacterized protein.
      
 0.476
rnf2
Ring finger protein 2.
      
 0.470
LOC103474606
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
    
  0.423
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.