STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrndCholinergic receptor, nicotinic, delta (muscle). (562 aa)    
Predicted Functional Partners:
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.692
rnls
Renalase, FAD-dependent amine oxidase.
      
 0.626
LOC103467111
Uncharacterized protein.
  
 
0.570
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
    
0.553
prss56
Serine protease 56; Belongs to the peptidase S1 family.
 
    
 0.550
rapsn
Receptor-associated protein of the synapse, 43kD.
   
 
 0.534
LOC103471384
Cholinergic receptor, nicotinic, beta 3b (neuronal); Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.492
LOC103464222
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
0.487
hus1
Checkpoint protein; Belongs to the HUS1 family.
      
 0.474
DOK7
Docking protein 7.
      
 0.470
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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