STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pplPeriplakin. (1776 aa)    
Predicted Functional Partners:
LOC103469736
Envoplakin a.
  
 
0.671
evpl
Envoplakin a.
  
 
0.669
LOC103468402
Envoplakin b.
  
 
0.623
ENSPREP00000007561
Kazrin, periplakin interacting protein b.
    
 0.580
KAZN
Kazrin, periplakin interacting protein a.
    
 0.580
LOC103463245
Keratin 97; Belongs to the intermediate filament family.
   
 0.558
LOC103480979
Uncharacterized protein.
   
  
 0.549
LOC103479638
Desmocollin 2 like; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.547
znf750
Zinc finger protein 750.
   
  
 0.543
MYOZ1
Myozenin 1.
  
   
 0.525
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.