STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yipf1Protein YIPF. (303 aa)    
Predicted Functional Partners:
yipf4
Protein YIPF.
   
 
 0.732
yif1b
Yip1 interacting factor homolog B (S. cerevisiae).
   
  
 0.671
LOC103458072
Yip1 domain-containing protein.
   
 
 0.632
ENSPREP00000004325
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.612
LOC103481595
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.612
yipf5
Protein YIPF.
   
 
 0.600
LOC103458978
Zgc:123321.
   
 
 0.600
selenos
Selenoprotein S.
   
 
 0.599
yipf3
Yip1 domain family, member 3.
   
  
 0.562
rabac1
PRA1 family protein.
   
  
 0.426
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.