STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gp1bbGlycoprotein Ib platelet subunit beta. (206 aa)    
Predicted Functional Partners:
LOC103460304
LRRCT domain-containing protein.
   
 0.983
LOC103467580
Glycoprotein IX (platelet).
   
0.976
LOC108166262
Si:ch211-117l17.7.
   
 
 0.900
LOC103468140
LRRNT domain-containing protein.
   
 0.839
LOC103481658
LRRNT domain-containing protein.
   
 0.839
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.683
Rtn4r
Reticulon 4 receptor.
     
 0.651
serpind1
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family.
     
 0.562
LOC103462943
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.560
ENSPREP00000002714
SUEL-type lectin domain-containing protein.
    
   0.560
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.