STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nbasNeuroblastoma amplified sequence. (2365 aa)    
Predicted Functional Partners:
zw10
Zw10 kinetochore protein.
    
 0.999
rint1
RAD50 interactor 1.
    
 0.996
stx18
Syntaxin 18.
    
 0.985
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.980
napg
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
    
 0.886
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
   
 0.851
snx15
Sorting nexin 15.
   
 0.842
LOC103475664
BCL2 interacting protein 1b.
   
 0.805
LOC103470871
BCL2 interacting protein 1a.
   
 0.805
LOC103464057
Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.801
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.