STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476184Interferon regulatory factor 2 binding protein 1. (589 aa)    
Predicted Functional Partners:
KCTD15
Potassium channel tetramerization domain containing 15.
   
  
 0.649
dcp1a
Decapping mRNA 1A.
    
 
 0.641
LOC103471006
Interferon regulatory factor 2.
   
 
 0.575
LOC103467586
Vestigial-like family member 4a.
    
 
 0.482
LOC103460975
Vestigial-like family member 4b.
    
 
 0.482
LOC103470615
Vestigial like 4 like.
    
 
 0.418
LOC103467943
Small ubiquitin-related modifier.
    
 
 0.402
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.