STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000017463Uncharacterized protein. (388 aa)    
Predicted Functional Partners:
THRA
Thyroid hormone receptor alpha.
  
  
 
0.900
grip1
Glutamate receptor interacting protein 1.
    
 
 0.688
ncor2
Nuclear receptor corepressor 2.
    
 0.641
ncor1
Nuclear receptor corepressor 1.
    
 0.641
trh
Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.
      
 0.626
TADA1
Transcriptional adaptor 1.
    
 0.602
avpr2
Arginine vasopressin receptor 2a, duplicate a.
     
 0.553
LOC103478548
Retinoid x receptor, beta b.
    
0.549
RXRB
Retinoid X receptor beta.
    
0.549
LOC103463575
Uncharacterized protein.
    
0.549
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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