STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsfN-ethylmaleimide-sensitive factor a. (754 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
   
 0.960
napg
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
   
 0.905
LOC103476592
Uncharacterized protein.
   
 0.884
LOC103457862
N-ethylmaleimide-sensitive factor attachment protein, beta b.
   
 0.884
napa
N-ethylmaleimide-sensitive factor attachment protein, alpha b.
   
 0.883
LOC103458105
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.866
ENSPREP00000004967
Uncharacterized protein.
   
 0.866
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.863
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
   
 0.858
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.858
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.