STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464694Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family. (194 aa)    
Predicted Functional Partners:
ntrk1
Tyrosine-protein kinase receptor.
     
 0.945
LOC103481795
Nerve growth factor receptor b.
     
  0.926
LOC103467432
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
  
  
 
0.902
ENSPREP00000007409
NGF domain-containing protein; Belongs to the NGF-beta family.
  
  
 
0.901
LOC103473467
Tyrosine-protein kinase receptor.
     
 0.809
ntrk2
Neurotrophic tyrosine kinase, receptor, type 2a.
     
 0.809
LOC103469672
Fibroblast growth factor receptor.
     
 0.671
pdgfra
Platelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
     
 0.667
met
MET proto-oncogene, receptor tyrosine kinase.
     
  0.666
LOC103464524
Eph receptor A2 a.
     
  0.666
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.