STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
esrrgEstrogen-related receptor gamma b. (341 aa)    
Predicted Functional Partners:
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
   
 0.755
ncor2
Nuclear receptor corepressor 2.
    
 0.586
ncor1
Nuclear receptor corepressor 1.
    
 0.586
nrip1
Nuclear receptor interacting protein 1b.
    
 0.583
ppargc1b
Peroxisome proliferator-activated receptor gamma, coactivator 1 beta.
    
 0.562
TADA1
Transcriptional adaptor 1.
    
 0.543
zfpm2
Zinc finger protein, FOG family member 2a.
    
 0.501
hspa14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
    
 0.470
frs2
Fibroblast growth factor receptor substrate 2b.
   
 
 0.458
LOC103478554
Sp8 transcription factor b.
    
 0.435
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.