STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRAThyroid hormone receptor alpha. (413 aa)    
Predicted Functional Partners:
ENSPREP00000017463
Uncharacterized protein.
  
  
 
0.900
trh
Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.
      
 0.677
ncor2
Nuclear receptor corepressor 2.
    
 0.641
ncor1
Nuclear receptor corepressor 1.
    
 0.641
TADA1
Transcriptional adaptor 1.
    
 0.602
LOC103467541
Colony stimulating factor 1b (macrophage).
   
  
 0.598
pax3
Paired box 3b.
   
 
 0.575
avpr2
Arginine vasopressin receptor 2a, duplicate a.
     
 0.553
LOC103478548
Retinoid x receptor, beta b.
    
0.549
RXRB
Retinoid X receptor beta.
    
0.549
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.