STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap20Cilia and flagella associated protein 20. (202 aa)    
Predicted Functional Partners:
Pacrg
PARK2 co-regulated.
    
 
 0.849
efhc1
EF-hand domain (C-terminal) containing 1.
    
 
 0.833
efhc2
EF-hand domain (C-terminal) containing 2.
    
 
 0.833
cfap45
Cilia and flagella associated protein 45.
    
 
 0.807
tekt2
Tektin 2 (testicular).
   
   0.793
ccdc173
Coiled-coil domain containing 173.
    
   0.790
efhb
Uncharacterized protein.
    
   0.790
tekt3
Tektin 3.
   
   0.790
mns1
Meiosis-specific nuclear structural 1.
    
   0.790
LOC103460395
Uncharacterized protein.
    
   0.790
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.