STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000017840Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
LOC103481249
Interferon regulatory factor 3.
      
 0.606
mavs
CARD_2 domain-containing protein.
      
 0.549
irf7
Interferon regulatory factor 7.
      
 0.549
rsad2
Radical S-adenosyl methionine domain containing 2.
      
 0.548
il10
Interleukin 10.
      
 0.523
LOC103475332
Interferon regulatory factor.
      
 0.475
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
      
 0.471
LOC103462757
IRF tryptophan pentad repeat domain-containing protein.
      
 0.469
LOC103467449
Toll-like receptor 9; Belongs to the Toll-like receptor family.
      
 0.469
LOC103470686
Interleukin-1.
      
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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