STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460214Uncharacterized protein. (269 aa)    
Predicted Functional Partners:
lmo2
LIM domain only 2 (rhombotin-like 1).
    
 0.933
zfpm1
Zinc finger protein, FOG family member 1.
   
 0.892
Tal1
BHLH domain-containing protein.
   
 0.740
LOC103479412
T-cell acute lymphocytic leukemia 1.
   
 0.740
nkx2-5
NK2 homeobox 5.
   
 0.713
zfpm2
Zinc finger protein, FOG family member 2a.
    
 0.691
LOC103468460
E1A binding protein p300 b.
    
 0.646
LOC103482005
E1A binding protein p300 a.
    
 0.646
ENSPREP00000028065
Forkhead box A3.
  
 0.633
wdr5
WD repeat domain 5.
    
 0.606
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.