STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdrd5Uncharacterized protein. (756 aa)    
Predicted Functional Partners:
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.754
ENSPREP00000028080
Piwi domain-containing protein.
   
 0.754
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.711
ENSPREP00000022562
Tudor domain containing 9.
   
0.672
akap1
A kinase (PRKA) anchor protein 1b.
   
0.664
fkbp6
Peptidylprolyl isomerase.
   
 
 0.563
exd1
3'-5' exonuclease domain-containing protein.
   
  
 0.558
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.549
LOC103463578
Uncharacterized protein.
      
 0.549
vps53
VPS53 subunit of GARP complex.
      
 0.549
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.