STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103470678Stromal cell-derived factor 2-like 1. (220 aa)    
Predicted Functional Partners:
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
   
 
 0.722
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 
 0.700
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 
 0.615
creld2
Cysteine-rich with EGF-like domains 2.
   
 
 0.597
ENSPREP00000025758
Peptidase S72 domain-containing protein.
    
 0.560
dag1
Dystroglycan 1.
    
 0.560
bcl2l13
BCL2 like 13.
      
 0.526
LOC103471399
Phosphoethanolamine methyltransferase.
   
  
 0.521
LOC103479782
Calreticulin.
   
 
 0.519
LOC103464072
Calreticulin.
   
 
 0.519
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.