STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000018081PH_9 domain-containing protein. (637 aa)    
Predicted Functional Partners:
ENSPREP00000018112
Uncharacterized protein.
 
     0.951
ENSPREP00000021720
Uncharacterized protein.
 
 
  0.919
ENSPREP00000018131
Uncharacterized protein.
 
      0.900
ACTN4
Actinin alpha 4.
 
  
  0.895
actn3
Actinin alpha 3b.
 
  
  0.891
LOC103476717
Actinin, alpha 2b.
 
  
  0.889
actn1
Actinin, alpha 1.
 
  
  0.880
sptan1
Spectrin alpha, non-erythrocytic 1.
   
0.862
ENSPREP00000005674
Uncharacterized protein.
 
 
    0.741
ENSPREP00000015831
Uncharacterized protein.
     
 0.604
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.