STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp2r3aProtein phosphatase 2, regulatory subunit B'', alpha. (1273 aa)    
Predicted Functional Partners:
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
    
 0.925
fbxo28
F-box protein 28.
   
    0.864
sprtn
SprT-like N-terminal domain.
   
    0.855
ppp2ca
Serine/threonine-protein phosphatase.
    
 0.749
LOC103471193
Serine/threonine-protein phosphatase.
    
 0.749
ppp2cb
Serine/threonine-protein phosphatase.
    
 0.749
ppp4r4
Protein phosphatase 4, regulatory subunit 4.
    
 0.687
Ppp4r1
Uncharacterized protein.
    
 0.622
ENSPREP00000016127
Uncharacterized protein.
    
 0.622
ENSPREP00000016150
Uncharacterized protein.
    
 0.622
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.