STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464710Troponin I type 1b (skeletal, slow). (170 aa)    
Predicted Functional Partners:
LOC103468062
Troponin C type 1b (slow).
   
 0.894
TNNC1
Troponin C type 1a (slow).
   
 0.894
ENSPREP00000018153
Troponin T type 1 (skeletal, slow).
  
 0.881
ENSPREP00000014606
Uncharacterized protein.
 
 0.879
ENSPREP00000018067
Troponin T type 2b (cardiac).
 
 0.878
LOC103465824
Uncharacterized protein.
 
 0.877
LOC103467415
Troponin T type 2a (cardiac).
 
 0.873
ENSPREP00000027277
Uncharacterized protein.
 
 0.872
tnnt1
Uncharacterized protein.
 
 0.871
LOC103465649
Troponin T type 3a (skeletal, fast).
 
 0.859
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.