STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000018104Uncharacterized protein. (185 aa)    
Predicted Functional Partners:
cdyl
Chromodomain protein, Y-like.
   
 0.696
CDYL2
Chromodomain Y like 2.
   
 0.696
ENSPREP00000018817
DDE_3 domain-containing protein.
 
 
  0.585
eed
Embryonic ectoderm development.
   
 0.584
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.532
ENSPREP00000001668
ANK_REP_REGION domain-containing protein.
    
 0.529
mphosph8
Chromo domain-containing protein.
    
 0.529
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.525
rbbp5
Retinoblastoma binding protein 5.
    
 0.524
LOC103475867
Lysine (K)-specific demethylase 6B, b.
   
 0.511
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.