STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYPSynaptophysin a. (288 aa)    
Predicted Functional Partners:
stx1a
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.562
LOC103472839
Vesicle-associated membrane protein 1.
   
 0.523
ENSPREP00000002501
Vesicle-associated membrane protein 2.
   
 0.523
ENSPREP00000016345
Zgc:92912.
   
 0.523
syn1
Synapsin I.
   
 
 0.490
grm8
Glutamate metabotropic receptor 8.
      
 0.475
LOC103473739
Transmembrane protein 119b.
      
 0.474
tmem119
Transmembrane protein 119a.
      
 0.474
galc
Galactosylceramidase b.
      
 0.473
SYN3
Synapsin III.
   
 
 0.437
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.