STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465934C-type lectin domain-containing protein. (359 aa)    
Predicted Functional Partners:
LOC103480967
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.686
colec11
Collectin sub-family member 11.
  
 
0.565
scara5
Scavenger receptor class A member 5; Ferritin receptor that mediates non-transferrin-dependent delivery of iron. Mediates cellular uptake of ferritin-bound iron by stimulating ferritin endocytosis from the cell surface with consequent iron delivery within the cell. Delivery of iron to cells by ferritin is required for the development of specific cell types, suggesting the existence of cell type-specific mechanisms of iron traffic in organogenesis, which alternatively utilize transferrin or non- transferrin iron delivery pathways.
  
0.559
ENSPREP00000013925
Uncharacterized protein.
  
 
   0.516
LOC103478000
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.492
ENSPREP00000016614
Peptidase S1 domain-containing protein.
   
 0.492
ENSPREP00000016678
CUB domain-containing protein.
   
 0.492
LOC103477998
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.492
masp1
Mannan-binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
   
 0.492
COLEC10
Collectin subfamily member 10.
   
 
0.487
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.