STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
heg1Heart development protein with EGF-like domains 1. (1075 aa)    
Predicted Functional Partners:
krit1
KRIT1 ankyrin repeat containing.
    
 
 0.832
ccm2
CCM2 scaffold protein.
   
  
 0.567
LOC108166170
Uncharacterized protein.
   
 0.467
ENSPREP00000003151
Uncharacterized protein.
   
 0.467
ENSPREP00000008864
Uncharacterized protein.
   
 0.467
LOC103464035
Hexosyltransferase.
   
 
 0.467
LOC103466701
Uncharacterized protein.
   
 0.467
Otog
Uncharacterized protein.
   
 0.467
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
  
   0.459
LOC103478036
Ras interacting protein 1.
   
 
 0.434
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.